Journal Issue: Algorithms Mol Biol Volume 20;  2025

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Journal List

Volume 20;  2025

Research

Fractional hitting sets for efficient multiset sketching
Timothé Rouzé, Igor Martayan, Camille Marchet, Antoine Limasset
Algorithms Mol Biol. 2025; 20: 1. Published online 2025 Feb 8. doi: 10.1186/s13015-024-00268-0
PMCID:
PMC11807336
Abstract Article PDF–3.0M
Finding high posterior density phylogenies by systematically extending a directed acyclic graph
Chris Jennings-Shaffer, David H. Rich, Matthew Macaulay, Michael D. Karcher, Tanvi Ganapathy, Shosuke Kiami, Anna Kooperberg, Cheng Zhang, Marc A. Suchard, Frederick A. Matsen, IV
Algorithms Mol Biol. 2025; 20: 2. Published online 2025 Feb 28. doi: 10.1186/s13015-025-00273-x
PMCID:
PMC11869616
Abstract Article PDF–2.5M
Mem-based pangenome indexing for k-mer queries
Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead
Algorithms Mol Biol. 2025; 20: 3. Published online 2025 Mar 1. doi: 10.1186/s13015-025-00272-y
PMCID:
PMC11871630
Abstract Article PDF–3.6M
The open-closed mod-minimizer algorithm
Ragnar Groot Koerkamp, Daniel Liu, Giulio Ermanno Pibiri
Algorithms Mol Biol. 2025; 20: 4. Published online 2025 Mar 17. doi: 10.1186/s13015-025-00270-0
PMCID:
PMC11912762
Abstract Article PDF–2.4M
Articles from Algorithms for Molecular Biology : AMB are provided here courtesy of BMC